Alignment of alleles: Atlantic cod (Gadus morhua) IGIV1S2

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 Q   V   T   V   T   Q   T   P   V       V   S   V   T   P   G   S   T   V   T
  AJ225249,IGIV1S2*01           CAG GTG ACT GTG ACT CAG ACA CCA GTA ... GTG TCC GTC ACT CCA GGA TCC ACA GTC ACT

                                                         __________________CDR1-IMGT____________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 L   T   C   K   T   Q   P   A   V   Y   R   W   S   D   V   Q   Q   G   I   F
  AJ225249,IGIV1S2*01           CTG ACC TGT AAA ACA CAA CCA GCC GTT TAC AGA TGG AGT GAT GTA CAA CAG GGT ATA TTT

                                                                                             ______________CDR2-
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   Q   Q   K   P   G   E   A   P   K   F   I   I   K   Y   I   S
  AJ225249,IGIV1S2*01           TGG TAC CAA CAG AAA CCT GGA GAA GCC CCC AAG TTC ATC ATA AAA TAT ATA AGT ... ...

                                IMGT________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     T   L   V   S   P   T   P       A   R   F   S   G   S   G
  AJ225249,IGIV1S2*01           ... ... ... ... ... ACA CTT GTA TCA CCA ACA CCA ... GCT CGG TTT AGT GGC AGT GGA

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                         S   S   T   D   F   S   L   T   I   N   D   A   Q   R   E   D   A   A
  AJ225249,IGIV1S2*01           ... ... AGC AGC ACT GAC TTC TCT CTG ACC ATC AAC GAC GCC CAG CGT GAA GAT GCA GCA

                                                __________________CDR3-IMGT____________________
                                101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116
                                 V   Y   H   C   R   S   F   H   V   L   N   S   V   H   V   V
  AJ225249,IGIV1S2*01           GTT TAT CAC TGT CGG AGT TTC CAC GTC CTA AAC AGT GTC CAT GTG GTC  #c
#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 21/03/2002
Last updated: Friday, 22-Sep-2023 18:24:46 CEST
Author: Nathalie Bosc